CDS

Accession Number TCMCG015C00227
gbkey CDS
Protein Id XP_027074915.1
Location complement(join(3487650..3489356,3489495..3489629,3489849..3489902,3490016..3490093,3497024..3497106,3497205..3497244,3497315..3497440,3497816..3498097))
Gene LOC113698990
GeneID 113698990
Organism Coffea arabica

Protein

Length 834aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA506972
db_source XM_027219114.1
Definition splicing factor 1 isoform X2 [Coffea arabica]

EGGNOG-MAPPER Annotation

COG_category A
Description K homology RNA-binding domain
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K13095        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs -

Sequence

CDS:  
ATGAGCACAAAACTTGAGCAGTCATCCAACTATAGTCAAAGCACTGCAACAAGTGTACCTGCTAGTGGCTCAAAAATCTCCAAGTTTGCAACCAAATCTGGGTTCTTAATACCAAAGAACAAAATATCTGGTTCATTGGTTCCCTTCATCCGAGGTGGTAAAAAGGGAGGCGGTGATGCAGCAAATGGAGAAAACAATAAGGAGGGGCAAAGGAAAACCAAATGGGGCCCTGATTTGACTCAGGATACTGCTGTTAGAAAAGGAAGAGCCTTAGCATATCAGACTCGGGTGGACCAAATAGCACAACAGCTGAGACTTGGAAAGTTGGAGACTGAGGAAAACCAAGATTTATCGTCACCATTTCAAACTGAGGAGCACAAATTTTCAGATCGTCAGCTTGAAGCTCAGGAATTGGAGCTATTGGAGCTTGAAAGGCGCGATGCTACTGGTGAAATACTGAAGTTAAATCCGAGCTACAAGGTTCCTGCTGATTATAAACCTGTGCTGAAAGAGGCAAAAGTTCCGATCCCTATTAAAGAGAATGCTGCATATAATATGGTTGGTTTAATTTTTGGGCCAGCAAATGACACTCAAAAGCGACTGGAAAAGGAAACTGGAGCTAAAGTACGAGTTTATGGAACAAGAGCAGTTACTGGAGAAAAGGTTGAAGTTACTACTCCTGATGGTAATGAAACATGTGGTAGTTATGATGAGTTGCACGTTCATGTATCAGCTGACACATATGAAAAGATTGATGCTGCGGTGGCTCTTATTGAACTGCTAGTCACCCCAGTTTCGGGGAATCCTGCTTCCATTACTGTAACATCAACTGCAACATCTGGTGACAATGTGAATAGTGGTGCTCCGAGTCAAGGCACACCTGGTACTAATGTGCCTGCTGGTGTGGCAAGTGGAGTGGCTCAGCCAAGTGTAGGATCTGGACCAGCACCTTCACCTAATCACTTTCAGCAGTACTCAGGGCCTTGGTTTCCTGTGGGTGCACCTCAGACACATGCCTTTCCATCATCAGGTTTTGCTGCGGCTCCTGTCCATTTGTCTCCATCACAGTTCAATCCCTCAAGTATGCTGCCAATATTTGGTCCTCGGCCAGTTGTCACAGTGGGATTTACTCCGGTTCCCCAGAATCCTTCACTTATTACCTCCGGGCCACAGCAACCACAAGTTCTGCAGAGGCCATACATTTCACATCCGCCACCTTTGTCAGCTTCACAACCTGCACCTATTCAATCAAATGTCACATCACCACAATTATCTACTAACCAGTCAGCACCAACTGGGCCCACCCAGTTTGGGAGTTCAATATCTATTTCTTACCAGCCACCTTATGCTGGATCATCTATAGTACCAGTGAACACTCCAACATCCATTGGAGCTGGAAATATGATGTCAATGACCCCTGCAACAACTGGTCTGCAGGGCCACCCCTCCATGGCTTCTCATCCTTTGGCTGTGTCCAGAGCTGCACCGCCAAATATCTTTCCAATTACCCAGCAATCTGCTTTGCAGTCAGCTGGTGCTGCAGTTAATCATCCCGCAAATGTCCCATACTTCAACTCTAGTTCCCACTTCCAACAGGGGCTTTCACTTTCTCCACTACCTTCAGCAGCAAAAGTACCTGGTCCCATGCAGTCTGTTATGCCACGAGCTGTGATACCTAATTCATCTCCCAATGTGGTACCAGGATCCACCCCTCTTCTTTCACCAGTGACATCTTCATCAACACTACTACATCCAGCTTCAGGAATTCCTAATTCTGGTCCTGCTGGTGCTGTCAGTTTTAATGCCATTAACCCTGCAAATATGACTGCTCCCAGACCACAGCAACCCAGCTCAAATGATTTTACTTTTCAGCCTCACCGGCCACACAATCCAGCCCTTGAAGTTGCTCATAGACCAAATACTCAACCTATACTTTTACATCCAAATCAATCAGCACAGCCATATCAGGAATCTCAGATTTCACCTGTTCAGCCAGGAATGCACATGTTGAGACTACCACCTGCAAATCCAGGGTTTTCTAGGCCTAATGTTGGCAATCAAATGATGCAGCCTAGAGCTCAAACGTCTGTTAACTTTCCCAGTAGTCCAACAGCGCTTCTGGGTCCACCTAGGCATGCACCATTTCCAGGTTCGAATGCTGCTCCTCTACTGCAACCAAGAAACTTCAATTTAGATCCCCCATTCGTCAATGCAGATGGAATTCCTCGAGCAGGGGGCCCAATGCAAATTCAGCAAAACTACCCTCCATCGGCAACTAGGCCGCCAAGTTTTGTTGCTCCAAATCAACATATTAACAGTAATATTTCCTTTCAACCTGCTGCTGGGCTATCTTCTAGAGCTTCTGGAGTACAGCAAGTGTATGATCCCTTCTCGCCAACATCTGTTTCTCTTAATACTCATTTAAGCAGTAACAGAGCAAAGATTCAGAAACAGGAGAGTGATCCAGAGTACGAAGACCTGATGGCCTCAGTCGGTGTAAAGTAA
Protein:  
MSTKLEQSSNYSQSTATSVPASGSKISKFATKSGFLIPKNKISGSLVPFIRGGKKGGGDAANGENNKEGQRKTKWGPDLTQDTAVRKGRALAYQTRVDQIAQQLRLGKLETEENQDLSSPFQTEEHKFSDRQLEAQELELLELERRDATGEILKLNPSYKVPADYKPVLKEAKVPIPIKENAAYNMVGLIFGPANDTQKRLEKETGAKVRVYGTRAVTGEKVEVTTPDGNETCGSYDELHVHVSADTYEKIDAAVALIELLVTPVSGNPASITVTSTATSGDNVNSGAPSQGTPGTNVPAGVASGVAQPSVGSGPAPSPNHFQQYSGPWFPVGAPQTHAFPSSGFAAAPVHLSPSQFNPSSMLPIFGPRPVVTVGFTPVPQNPSLITSGPQQPQVLQRPYISHPPPLSASQPAPIQSNVTSPQLSTNQSAPTGPTQFGSSISISYQPPYAGSSIVPVNTPTSIGAGNMMSMTPATTGLQGHPSMASHPLAVSRAAPPNIFPITQQSALQSAGAAVNHPANVPYFNSSSHFQQGLSLSPLPSAAKVPGPMQSVMPRAVIPNSSPNVVPGSTPLLSPVTSSSTLLHPASGIPNSGPAGAVSFNAINPANMTAPRPQQPSSNDFTFQPHRPHNPALEVAHRPNTQPILLHPNQSAQPYQESQISPVQPGMHMLRLPPANPGFSRPNVGNQMMQPRAQTSVNFPSSPTALLGPPRHAPFPGSNAAPLLQPRNFNLDPPFVNADGIPRAGGPMQIQQNYPPSATRPPSFVAPNQHINSNISFQPAAGLSSRASGVQQVYDPFSPTSVSLNTHLSSNRAKIQKQESDPEYEDLMASVGVK